The function generates look up tables for calculating total number of annual dengue infections, mild febrile cases, cases requiring hospitalization and R0. R0 is estimated for two different assumptions of the infectiousness of the four dengue infections.

create_lookup_tables(age_struct, age_band_tags, age_band_L_bounds,
  age_band_U_bounds, parms)

Arguments

age_struct

dataframe of the proportion of individuals in different 5-yr age groups, for each country.

age_band_tags

character string of the names of the columns of the `age_structure` dataframe containing the actual age structure data.

age_band_L_bounds

integers of the lower limits of the age groups.

age_band_U_bounds

integers pf the upper limits of the age groups.

parms

list of user-defined parameters.