The function formats human-realetd model outputs as a long data frame.
Arguments
- x
Zika_model_simulation object.
- var_select
Vector of human compartment names,
c("S", "I1", "R1")
. In addition a number of additional variables can be requested. These include:"Ntotal" Total number of people
"inf_1" Daily infections
"MC" Daily microcephaly cases
"inf_1_w" Weekly infections per 1000
"MC_w" Weekly microcephaly cases per 1000
- keep
name of variable to stratify by (allowed are
c("patch", "vaccine", "all")
. Default is no stratification)- patch_id
ID of patch to keep in the summary. Default to keep all patches.